STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_08064L-type lectin-like domain-containing protein. (445 aa)    
Predicted Functional Partners:
B0A54_07793
L-type lectin-like domain-containing protein.
  
 
0.897
B0A54_14438
GOLD domain-containing protein.
   
 0.854
B0A54_06528
GOLD domain-containing protein.
   
 0.854
B0A54_13280
Endoplasmic reticulum vesicle protein 25.
   
 0.813
B0A54_10774
Endoplasmic reticulum vesicle protein 25.
   
 0.813
B0A54_13258
ER-derived vesicles protein ERV14.
     
 0.788
B0A54_14277
ER-derived vesicles protein ERV14.
     
 0.788
B0A54_00561
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.771
B0A54_01316
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.771
B0A54_09984
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.758
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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