STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_08923t-SNARE coiled-coil homology domain-containing protein. (498 aa)    
Predicted Functional Partners:
B0A54_15384
V-SNARE coiled-coil homology domain-containing protein.
   
 0.999
B0A54_00661
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.984
B0A54_01293
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.984
B0A54_15567
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.980
B0A54_09814
Uncharacterized protein.
    
 
 0.980
B0A54_10216
Uncharacterized protein.
    
 
 0.980
B0A54_15503
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.980
B0A54_11359
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.976
B0A54_06676
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.976
B0A54_15299
SynN domain-containing protein.
   
 0.975
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.