STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_07523Metacaspase-1A. (266 aa)    
Predicted Functional Partners:
B0A54_03899
Endonuclease.
    
 
 0.541
B0A54_02668
Uncharacterized protein.
    
 
 0.541
B0A54_17509
Uncharacterized protein; Belongs to the BI1 family.
      
 0.507
B0A54_11235
Pro-apoptotic serine protease.
      
 0.470
B0A54_05885
Pro-apoptotic serine protease.
      
 0.470
B0A54_13952
KEN domain-containing protein.
      
 0.459
B0A54_10433
Pyr_redox_2 domain-containing protein.
      
 0.455
B0A54_05286
Pyr_redox_2 domain-containing protein.
      
 0.455
B0A54_13818
ATPase_AAA_core domain-containing protein.
    
 
 0.433
B0A54_13946
ATPase_AAA_core domain-containing protein.
    
 
 0.433
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.