STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_06616Protein pyrABCN. (1876 aa)    
Predicted Functional Partners:
B0A54_00187
Argininosuccinate synthase.
 
 
 0.973
B0A54_01449
Argininosuccinate synthase.
 
 
 0.973
B0A54_10810
Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.963
B0A54_17702
Amidophosphoribosyltransferase.
  
 
 0.961
B0A54_15115
Amidohydro-rel domain-containing protein.
   
 
 0.961
B0A54_10787
Amidophosphoribosyltransferase.
  
 
 0.961
B0A54_11743
Amidohydro-rel domain-containing protein.
   
 
 0.961
B0A54_00583
Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
0.944
B0A54_01216
Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
0.944
B0A54_16278
Carbamoyl-phosphate synthase arginine-specific small chain.
  
0.938
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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