STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_06968RWD domain-containing protein. (233 aa)    
Predicted Functional Partners:
B0A54_09138
Ribosome-interacting GTPase 2.
   
 
 0.982
B0A54_03055
Ribosome-interacting GTPase 2.
   
 
 0.982
B0A54_15422
Ribosome-interacting GTPase 1.
   
 
 0.932
B0A54_14935
Ribosome-interacting GTPase 1.
   
 
 0.932
B0A54_15140
Translation machinery-associated protein 22.
   
    0.777
B0A54_11935
Translation machinery-associated protein 22.
   
    0.777
B0A54_08499
MAP kinase kinase kinase.
    
   0.776
B0A54_07488
MAP kinase kinase kinase.
    
   0.776
B0A54_05806
Uncharacterized protein.
    
 
 0.752
B0A54_05202
Uncharacterized protein.
    
 
 0.752
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.