STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_03117Uncharacterized protein. (1156 aa)    
Predicted Functional Partners:
B0A54_16340
Uncharacterized protein.
    
 0.678
B0A54_03217
Uncharacterized protein.
    
 0.678
B0A54_08254
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.619
B0A54_02790
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.619
B0A54_15567
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.613
B0A54_15503
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.613
B0A54_09332
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.599
B0A54_12625
WW domain-containing protein.
     
 0.562
B0A54_07054
WW domain-containing protein.
     
 0.562
B0A54_16086
WD_REPEATS_REGION domain-containing protein.
   
 
  0.559
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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