STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_03952GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (293 aa)    
Predicted Functional Partners:
B0A54_03302
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
  
 
0.949
B0A54_09596
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
  
 
0.949
B0A54_16724
RPOLD domain-containing protein.
   
 
 0.885
B0A54_14170
RPOLD domain-containing protein.
   
 
 0.885
B0A54_08074
Uncharacterized protein.
   
 
 0.856
B0A54_16395
RTR1-type domain-containing protein.
    
 
 0.847
B0A54_14785
RTR1-type domain-containing protein.
    
 
 0.847
B0A54_02921
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 
 0.836
B0A54_17040
U3 small nucleolar RNA-associated protein 22.
   
    0.787
B0A54_03755
U3 small nucleolar RNA-associated protein 22.
   
    0.787
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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