STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_03395GRAM domain-containing protein. (855 aa)    
Predicted Functional Partners:
B0A54_03396
PH domain-containing protein.
 
     0.920
B0A54_16325
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
 
  
   0.743
B0A54_13241
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
 
  
   0.738
B0A54_09798
Xanthine dehydrogenase.
   
 
 0.553
B0A54_10200
Xanthine dehydrogenase.
   
 
 0.553
B0A54_17172
PX domain-containing protein.
   
 
 0.542
B0A54_14560
PX domain-containing protein.
   
 
 0.542
B0A54_16686
Sorting nexin-4.
    
 
 0.524
B0A54_12509
UDPG_MGDP_dh_C domain-containing protein.
     
 0.524
B0A54_02995
UDP-glucose 6-dehydrogenase.
     
 0.524
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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