STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_03580Cupin type-1 domain-containing protein. (181 aa)    
Predicted Functional Partners:
B0A54_09332
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.550
B0A54_04348
Uncharacterized protein.
      
 0.444
B0A54_09898
Uncharacterized protein.
      
 0.444
B0A54_14431
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
      
 0.443
B0A54_06537
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
      
 0.443
B0A54_15511
Uncharacterized protein.
      
 0.426
B0A54_02874
Uncharacterized protein.
      
 0.426
B0A54_07392
Uncharacterized protein.
      
 0.422
B0A54_05330
Uncharacterized protein.
      
 0.422
B0A54_04847
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.422
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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