STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_03758Uncharacterized protein. (557 aa)    
Predicted Functional Partners:
B0A54_13400
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.743
B0A54_06557
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.743
B0A54_04079
Peptidase_M24 domain-containing protein.
   
 
 0.742
B0A54_02539
Peptidase_M24 domain-containing protein.
   
 
 0.742
B0A54_06813
C2H2-type domain-containing protein.
   
 
 0.732
B0A54_03241
C2H2-type domain-containing protein.
   
 
 0.732
B0A54_16317
Thioredoxin domain-containing protein.
    
  0.686
B0A54_15022
Thioredoxin domain-containing protein.
    
  0.686
B0A54_14696
Thioredoxin domain-containing protein.
    
  0.686
B0A54_13249
Thioredoxin domain-containing protein.
    
  0.686
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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