STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_01894Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (436 aa)    
Predicted Functional Partners:
B0A54_13232
Vacuolar protein-sorting-associated protein 46.
   
 0.997
B0A54_01667
Uncharacterized protein.
   
 0.996
B0A54_09464
Uncharacterized protein.
   
 0.996
B0A54_06284
DOA4-independent degradation protein 4.
    
 0.995
B0A54_07199
DOA4-independent degradation protein 4.
    
 0.995
B0A54_03300
Uncharacterized protein.
    
 0.995
B0A54_08568
Uncharacterized protein.
    
 0.995
B0A54_17910
Vacuolar-sorting protein snf7.
    
 0.981
B0A54_17285
Vacuolar-sorting protein SNF7.
    
 0.981
B0A54_10677
Vacuolar-sorting protein SNF7.
    
 0.981
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.