STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_02156RRN7-type domain-containing protein. (544 aa)    
Predicted Functional Partners:
B0A54_17200
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
B0A54_17415
Ribosomal_L14e domain-containing protein.
   
 0.999
B0A54_16675
40S ribosomal protein S19.
   
 0.999
B0A54_16655
Uncharacterized protein.
   
 0.999
B0A54_16358
60S ribosomal protein L21-A.
   
 0.999
B0A54_16359
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
B0A54_16785
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
B0A54_15376
60S ribosomal protein L24.
   
 0.999
B0A54_15519
60S ribosomal protein L2.
   
 0.999
B0A54_14499
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.