STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_01223Uncharacterized protein. (366 aa)    
Predicted Functional Partners:
B0A54_16116
GTP-binding protein ypt1.
   
 
 0.908
B0A54_09330
GTP-binding protein ypt1.
   
 
 0.908
B0A54_07513
Uncharacterized protein.
   
 
 0.908
B0A54_05430
Uncharacterized protein.
   
 
 0.908
B0A54_09218
2Fe-2S ferredoxin-type domain-containing protein.
    
 
 0.876
B0A54_09468
Lactamase_B domain-containing protein.
    
 
 0.876
B0A54_01671
Lactamase_B domain-containing protein.
    
 
 0.876
B0A54_02482
Adrenodoxin mitochondrial.
    
 
 0.876
B0A54_13979
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.874
B0A54_11541
NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial; Belongs to the complex I 20 kDa subunit family.
    
   0.874
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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