STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_00134Rab-GAP TBC domain-containing protein. (789 aa)    
Predicted Functional Partners:
B0A54_06361
Septum-promoting GTP-binding protein 1.
    
 0.919
B0A54_07271
Septum-promoting GTP-binding protein 1.
    
 0.919
B0A54_14662
Serine/threonine-protein kinase.
    
 0.854
B0A54_08884
Serine/threonine-protein kinase.
    
 0.854
B0A54_14354
Uncharacterized protein.
    
 0.823
B0A54_04415
Uncharacterized protein.
    
 0.823
B0A54_13828
Uncharacterized protein.
    
 0.801
B0A54_11164
Uncharacterized protein.
    
 0.801
B0A54_03140
Putative Ras-related protein Rab7.
    
 0.797
B0A54_15767
Ras-related protein Rab-8A.
    
 0.779
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.