STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_00361CBFD_NFYB_HMF domain-containing protein. (149 aa)    
Predicted Functional Partners:
B0A54_16054
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.984
B0A54_12997
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.984
B0A54_01386
TATA-box-binding protein.
    
 
 0.980
B0A54_00127
TATA-box-binding protein.
    
 
 0.980
B0A54_08616
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.930
B0A54_03312
Uncharacterized protein.
   
 
 0.930
B0A54_13107
SGF29 C-terminal domain-containing protein.
    
 0.921
B0A54_13999
SGF29 C-terminal domain-containing protein.
    
 0.921
B0A54_16423
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.919
B0A54_14815
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.919
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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