STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_16850CBM20 domain-containing protein. (307 aa)    
Predicted Functional Partners:
B0A54_08623
60S ribosomal protein L35.
  
   0.966
B0A54_10972
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.954
B0A54_04648
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.954
B0A54_05807
60S ribosomal protein L19-2.
  
   0.950
B0A54_08795
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.948
B0A54_14015
60S ribosomal protein L5.
  
 
 0.944
B0A54_13120
60S ribosomal protein L5.
  
 
 0.944
B0A54_07634
60S ribosomal protein L25.
  
 
 0.939
B0A54_02319
60S ribosomal protein L25.
  
 
 0.939
B0A54_04776
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.937
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.