STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_14487N-acetyltransferase domain-containing protein. (215 aa)    
Predicted Functional Partners:
B0A54_06780
WD_REPEATS_REGION domain-containing protein.
   
 0.604
B0A54_04484
WD_REPEATS_REGION domain-containing protein.
   
 0.604
B0A54_10826
Ipi1_N domain-containing protein.
    
 0.594
B0A54_07364
Ipi1_N domain-containing protein.
    
 0.594
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.572
NOP7-2
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.572
B0A54_00244
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.566
B0A54_05816
WSC domain-containing protein.
    
 0.557
B0A54_05211
WSC domain-containing protein.
    
 0.557
B0A54_07470
CLP1_P domain-containing protein.
    
  0.525
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.