STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_05452Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
B0A54_05453
Uncharacterized protein.
 
     0.467
B0A54_10813
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
      
 0.451
B0A54_15132
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.438
B0A54_11758
Uncharacterized protein.
      
 0.438
B0A54_11562
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
      
 0.422
B0A54_00473
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
      
 0.422
B0A54_13740
Uncharacterized protein.
      
 0.408
B0A54_11810
Uncharacterized protein.
      
 0.408
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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