Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75624.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
KWZ75623.1
ABC transporter, substrate-binding protein, thiB family; KEGG: pfl:PFL_3038 7.4e-05 fbpA; iron(III) ABC transporter periplasmic iron(III)-binding protein K02012.
       0.568
KWZ75625.1
Hypothetical protein.
       0.539
KWZ75621.1
KEGG: cfi:Celf_0336 1.7e-76 ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
       0.514
KWZ75622.1
ABC transporter, permease protein; KEGG: cnc:CNE_2c19150 3.2e-23 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02011; Psort location: CytoplasmicMembrane, score: 10.00.
       0.514
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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