STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75632.1KEGG: mcu:HMPREF0573_11023 3.3e-297 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306; Psort location: Cytoplasmic, score: 9.97; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (733 aa)    
Predicted Functional Partners:
dmsB
Dimethylsulfoxide reductase, chain B; KEGG: pfr:PFREUD_20600 1.7e-92 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K07307; Psort location: Cytoplasmic, score: 9.97.
 0.998
KWZ75649.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.850
KWZ75646.1
Tat pathway signal sequence domain protein; KEGG: mcu:HMPREF0573_11021 7.5e-69 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.832
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.785
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.601
KWZ74815.1
Putative NADH oxidoreductase, F subunit; KEGG: mcu:HMPREF0573_10997 1.2e-180 nuoF; NADH dehydrogenase K00335; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.601
KWZ74814.1
NADH-quinone oxidoreductase, E subunit; KEGG: mcu:HMPREF0573_10996 2.7e-80 nuoE; NADH dehydrogenase K00334; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.593
KWZ75633.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
   
   0.565
KWZ72051.1
Hypothetical protein; KEGG: hiq:CGSHiGG_03235 2.0e-08 fbpC; ferric transporter ATP-binding subunit K02012.
  
     0.545
KWZ75631.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.538
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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