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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75642.1Sugar-binding domain protein; KEGG: rpf:Rpic12D_2742 2.5e-36 LacI family transcriptional regulator K03435; Psort location: Cytoplasmic, score: 9.67. (374 aa)    
Predicted Functional Partners:
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
  0.816
KWZ74965.1
Sugar-binding domain protein; KEGG: cai:Caci_1344 6.1e-58 LacI family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
     0.775
KWZ72039.1
KEGG: ami:Amir_1871 7.1e-25 LacI family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67.
  
     0.775
KWZ72022.1
Hypothetical protein; KEGG: fno:Fnod_0418 1.2e-15 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.774
KWZ75641.1
Transporter, major facilitator family protein; KEGG: ase:ACPL_1277 5.2e-10 EmrB/QacA subfamily drug resistance transporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KWZ74308.1
KEGG: cag:Cagg_0275 1.4e-26 LacI family transcriptional regulator K02529; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.772
KWZ74488.1
Phosphocarrier, HPr family; KEGG: car:cauri_1482 6.5e-15 ptsH; Phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 9.97.
   
   0.674
rihB
Putative cytidine/uridine-specific hydrolase; KEGG: aau:AAur_3646 2.1e-119 inosine-uridine preferring nucleoside hydrolase (IunH); K01239 purine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
       0.642
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
   0.602
pheT
phenylalanine--tRNA ligase, beta subunit; KEGG: mcu:HMPREF0573_10030 5.7e-245 pheT; phenylalanine--tRNA ligase K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.568
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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