STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75256.1Hypothetical protein; KEGG: ase:ACPL_5539 5.2e-37 Regulator of nonsense transcripts 1; Psort location: Cytoplasmic, score: 7.50. (1331 aa)    
Predicted Functional Partners:
KWZ74942.1
HRDC domain protein; KEGG: xce:Xcel_0786 8.9e-192 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.881
KWZ75255.1
Hypothetical protein.
       0.773
KWZ74915.1
Phosphotransferase enzyme family protein; KEGG: scl:sce2725 2.1e-11 phosphotransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.766
KWZ72900.1
DivIVA domain repeat protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.760
KWZ72983.1
Hypothetical protein.
  
     0.748
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.746
KWZ72791.1
Hypothetical protein.
  
     0.740
KWZ72984.1
Hypothetical protein.
  
     0.734
KWZ73049.1
Putative ATP synthase F0, A subunit; KEGG: aai:AARI_07730 1.0e-47 glycosyl transferase family 2; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.727
KWZ73048.1
Hypothetical protein; KEGG: bha:BH1667 0.0087 aroE; 3-phosphoshikimate 1-carboxyvinyltransferase K00800.
  
    0.717
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.