STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75272.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (246 aa)    
Predicted Functional Partners:
KWZ75273.1
KEGG: apb:SAR116_2174 3.2e-06 cold-shock DNA-binding domain-containing protein K03704; Psort location: Cytoplasmic, score: 9.97.
       0.827
KWZ75271.1
Putative permease; KEGG: bcz:BCZK0244 6.8e-75 guanine-hypoxanthine permease; xanthine/uracil permease family protein K06901; Psort location: CytoplasmicMembrane, score: 10.00.
      0.779
KWZ72888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.737
KWZ74688.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.727
KWZ72141.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.700
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.686
KWZ73044.1
Hypothetical protein.
  
     0.648
KWZ72548.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.640
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.615
KWZ72159.1
Hypothetical protein; KEGG: ana:all2875 0.00068 two-component hybrid sensor and regulator; K02489 two-component system, cell cycle sensor kinase and response regulator.
  
     0.614
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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