STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75302.1Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: rha:RHA1_ro05517 2.5e-36 dehydrogenase K07124; Psort location: Cytoplasmic, score: 9.67; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.822
KWZ75301.1
RNA methyltransferase, TrmH family; KEGG: ase:ACPL_7827 2.9e-58 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB; Psort location: Cytoplasmic, score: 7.50.
       0.791
KWZ75304.1
KEGG: ske:Sked_35330 3.5e-87 exodeoxyribonuclease III; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
  
    0.653
KWZ74800.1
O-succinylbenzoate-CoA ligase family protein; KEGG: cfi:Celf_0920 4.4e-64 AMP-dependent synthetase and ligase; K01911 O-succinylbenzoic acid--CoA ligase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.631
KWZ74660.1
KEGG: pfr:PFREUD_02440 9.0e-128 caiC; crotonobetaine/carnitine-CoA ligase K02182; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.631
KWZ72529.1
Putative CoA ligase; KEGG: mcu:HMPREF0573_11567 3.2e-139 lcfA; putative long-subunit-fatty-acid--CoA ligase K01897; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.631
KWZ72556.1
AMP-binding enzyme; KEGG: ahe:Arch_1447 1.2e-77 AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.631
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.617
KWZ75305.1
Hydrolase, NUDIX family; KEGG: sgg:SGGBAA2069_c14730 4.2e-59 MutT/NUDIX hydrolase family protein; Psort location: Cytoplasmic, score: 7.50.
       0.556
KWZ75300.1
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
       0.514
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.