STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75319.1KEGG: mav:MAV_3849 6.6e-77 wrbA; NAD(P)H:quinone oxidoreductase, type IV K03809; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the WrbA family. (198 aa)    
Predicted Functional Partners:
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
KWZ74491.1
Ferritin-like protein; KEGG: rsa:RSal33209_0125 2.5e-22 dps; ferroxidase K04047; Psort location: Cytoplasmic, score: 9.97; Belongs to the Dps family.
  
  
 0.663
KWZ74688.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
   
    0.571
KWZ73033.1
KEGG: mct:MCR_1551 0.00052 LysM domain-containing protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.550
KWZ75318.1
KEGG: son:SO_0916 9.1e-05 MarR family transcriptional regulator; K03828 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
    0.512
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.428
KWZ74322.1
Catalase; KEGG: tfu:Tfu_1649 4.4e-190 catalase K03781; Psort location: Cytoplasmic, score: 9.97; Belongs to the catalase family.
  
  
 0.418
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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