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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75165.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (284 aa)    
Predicted Functional Partners:
KWZ72612.1
Hypothetical protein.
  
     0.579
hrpB
KEGG: ach:Achl_1784 3.7e-186 ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB; Psort location: Cytoplasmic, score: 7.50.
       0.559
KWZ72986.1
Hypothetical protein; KEGG: cle:Clole_4220 1.0e-18 maltose O-acetyltransferase K00661; Psort location: Cytoplasmic, score: 9.97.
  
     0.517
KWZ75162.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.503
dcd
dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.503
KWZ75149.1
Hypothetical protein; KEGG: pfr:PFREUD_08010 1.2e-118 galT; galactose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.484
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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