close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75009.1Lsr2 family protein. (107 aa)    
Predicted Functional Partners:
KWZ72104.1
mIHF protein; KEGG: cmi:CMM_1780 3.1e-09 gmkA; guanylate kinase K00942; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.821
KWZ75010.1
Hypothetical protein.
       0.773
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   
 0.736
KWZ74688.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.698
KWZ74930.1
DNA-binding protein HB1; KEGG: apb:SAR116_0125 4.2e-11 histone family protein DNA-binding protein K03530; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial histone-like protein family.
      
 0.641
KWZ75011.1
Transcriptional regulator, AsnC family; KEGG: bnm:BALAC2494_00881 3.5e-16 anthranilate phosphoribosyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.639
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
   
 0.617
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.616
KWZ73044.1
Hypothetical protein.
  
     0.616
KWZ72141.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.592
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.