STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75013.1MMPL family protein; KEGG: tpr:Tpau_4044 1.6e-114 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (824 aa)    
Predicted Functional Partners:
KWZ75012.1
Transcriptional regulator, TetR family.
  
  
 0.725
tgt
tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]
      0.497
KWZ72459.1
KEGG: apb:SAR116_2479 2.9e-10 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.480
KWZ75011.1
Transcriptional regulator, AsnC family; KEGG: bnm:BALAC2494_00881 3.5e-16 anthranilate phosphoribosyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.470
KWZ72530.1
Hypothetical protein; KEGG: bnm:BALAC2494_00035 1.4e-140 Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.445
KWZ75063.1
Kinase domain protein; KEGG: mcu:HMPREF0573_10646 3.2e-164 pknB; putative non-specific serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.99.
    
 
 0.433
KWZ72152.1
PASTA domain protein; KEGG: mcu:HMPREF0573_11797 4.3e-137 spk1; non-specific serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 8.78.
    
 
 0.433
KWZ72114.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.405
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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