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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75024.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (239 aa)    
Predicted Functional Partners:
KWZ75022.1
ABC transporter, ATP-binding protein; KEGG: bju:BJ6T_61710 2.8e-62 hypothetical protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.783
KWZ75023.1
Hypothetical protein; KEGG: pva:Pvag_0148 0.00051 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
KWZ75021.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bao:BAMF_1601 3.1e-120 bpr; bacillopeptidase F K13276; Psort location: Extracellular, score: 9.75.
  
    0.433
KWZ75621.1
KEGG: cfi:Celf_0336 1.7e-76 ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.430
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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