STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75035.1Methyltransferase, HemK family; KEGG: cro:ROD_18011 4.6e-15 hemK; protein methyltransferase hemk (protein-glutamine N methyltransferase) K02493; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the methyltransferase superfamily. (491 aa)    
Predicted Functional Partners:
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
 
 0.927
KWZ75036.1
Hypothetical protein; KEGG: mad:HP15_2222 1.0e-05 ribonuclease, Rne/Rng family; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 7.50.
       0.773
KWZ75037.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: pfr:PFREUD_01560 9.1e-48 short subunit dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
     0.696
KWZ74932.1
Type III restriction enzyme, res subunit; KEGG: hvo:HVO_1598 7.5e-13 rad25c; DNA repair helicase Rad25; Psort location: Cytoplasmic, score: 7.50.
 
 
   0.604
KWZ75038.1
Response regulator receiver domain protein; KEGG: fal:FRAAL4813 5.2e-45 two-component system response regulator K07693; Psort location: Cytoplasmic, score: 9.97.
       0.590
KWZ75039.1
Histidine kinase; KEGG: krh:KRH_07150 1.5e-30 two-component histidine kinase K07778; Psort location: CytoplasmicMembrane, score: 10.00.
       0.590
KWZ75040.1
ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0031 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.590
KWZ75041.1
ABC transporter, ATP-binding protein; KEGG: ase:ACPL_4296 3.4e-57 antibiotic transport system ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
       0.590
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.540
atpH
ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.519
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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