STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ75040.1ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0031 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00. (268 aa)    
Predicted Functional Partners:
KWZ75041.1
ABC transporter, ATP-binding protein; KEGG: ase:ACPL_4296 3.4e-57 antibiotic transport system ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.964
KWZ75038.1
Response regulator receiver domain protein; KEGG: fal:FRAAL4813 5.2e-45 two-component system response regulator K07693; Psort location: Cytoplasmic, score: 9.97.
     0.957
KWZ75039.1
Histidine kinase; KEGG: krh:KRH_07150 1.5e-30 two-component histidine kinase K07778; Psort location: CytoplasmicMembrane, score: 10.00.
    0.947
KWZ75176.1
Nitroreductase family protein; KEGG: cdi:DIP0265 6.6e-61 nitroreductase; K00540; Psort location: Cytoplasmic, score: 7.50; Belongs to the flavin oxidoreductase frp family.
  
  
 0.779
KWZ75037.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: pfr:PFREUD_01560 9.1e-48 short subunit dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.737
KWZ75035.1
Methyltransferase, HemK family; KEGG: cro:ROD_18011 4.6e-15 hemK; protein methyltransferase hemk (protein-glutamine N methyltransferase) K02493; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the methyltransferase superfamily.
       0.590
KWZ75036.1
Hypothetical protein; KEGG: mad:HP15_2222 1.0e-05 ribonuclease, Rne/Rng family; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 7.50.
       0.590
KWZ73947.1
CAAX amino terminal protease family protein; KEGG: hne:HNE_2661 0.0085 S54 family peptidase K01362; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.583
KWZ75042.1
Hypothetical protein.
       0.559
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
     
 0.481
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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