STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnhARibonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (295 aa)    
Predicted Functional Partners:
KWZ72610.1
Putative prolyl aminopeptidase; KEGG: cva:CVAR_0351 1.4e-69 pipB; proline imino-peptidase; Psort location: Cytoplasmic, score: 9.67.
 
      0.897
KWZ75054.1
ADP-ribosylglycohydrolase; KEGG: pfr:PFREUD_12120 1.2e-54 ADP-ribosyl-[dinitrogen reductase] hydrolase; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
KWZ72914.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
 
 0.708
KWZ75055.1
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family; KEGG: bme:BMEI0894 3.2e-77 alkanal monooxygenase subunit alpha; Psort location: Cytoplasmic, score: 7.50.
       0.675
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; KEGG: pad:TIIST44_06205 5.2e-148 glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase; Psort location: Cytoplasmic, score: 9.67.
 
      0.560
KWZ75468.1
KEGG: shn:Shewana3_3590 7.6e-12 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.67.
   
 0.555
KWZ74677.1
KEGG: shn:Shewana3_3590 5.8e-14 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.67.
   
 0.555
KWZ72424.1
KEGG: apb:SAR116_0400 0.0029 single-stranded DNA-binding protein K03111.
   
 0.555
KWZ75465.1
Hypothetical protein.
    
  0.552
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.548
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.