| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KWZ75070.1 | infA | HMPREF3198_00369 | HMPREF3198_01548 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.995 |
| KWZ75070.1 | rpsB | HMPREF3198_00369 | HMPREF3198_01261 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S2; KEGG: apb:SAR116_0519 9.7e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family. | 0.995 |
| KWZ75070.1 | rpsC | HMPREF3198_00369 | HMPREF3198_01575 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.995 |
| KWZ75070.1 | rpsE | HMPREF3198_00369 | HMPREF3198_01560 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.995 |
| KWZ75070.1 | rpsH | HMPREF3198_00369 | HMPREF3198_01563 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.995 |
| KWZ75070.1 | rpsJ | HMPREF3198_00369 | HMPREF3198_01582 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.995 |
| KWZ75070.1 | rpsK | HMPREF3198_00369 | HMPREF3198_01546 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
| KWZ75070.1 | rpsQ | HMPREF3198_00369 | HMPREF3198_01572 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.995 |
| KWZ75070.1 | rpsS | HMPREF3198_00369 | HMPREF3198_01577 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.995 |
| KWZ75070.1 | rpsZ | HMPREF3198_00369 | HMPREF3198_01564 | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.995 |
| infA | KWZ75070.1 | HMPREF3198_01548 | HMPREF3198_00369 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; cell envelope integrity inner membrane protein TolA K03646. | 0.995 |
| infA | rpsB | HMPREF3198_01548 | HMPREF3198_01261 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S2; KEGG: apb:SAR116_0519 9.7e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
| infA | rpsC | HMPREF3198_01548 | HMPREF3198_01575 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| infA | rpsE | HMPREF3198_01548 | HMPREF3198_01560 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
| infA | rpsH | HMPREF3198_01548 | HMPREF3198_01563 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
| infA | rpsJ | HMPREF3198_01548 | HMPREF3198_01582 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
| infA | rpsK | HMPREF3198_01548 | HMPREF3198_01546 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| infA | rpsQ | HMPREF3198_01548 | HMPREF3198_01572 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
| infA | rpsS | HMPREF3198_01548 | HMPREF3198_01577 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
| infA | rpsZ | HMPREF3198_01548 | HMPREF3198_01564 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.999 |
STRING v12.5 is now available!
