Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KWZ74742.1 | KWZ74743.1 | HMPREF3198_00379 | HMPREF3198_00380 | FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-17 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.596 |
KWZ74742.1 | KWZ74744.1 | HMPREF3198_00379 | HMPREF3198_00381 | FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-17 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 10.00. | Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5. | 0.533 |
KWZ74742.1 | KWZ74745.1 | HMPREF3198_00379 | HMPREF3198_00382 | FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-17 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 10.00. | Negative regulator of genetic competence ClpC/MecB; KEGG: mbb:BCG_3661c 0. clpC; putative ATP-dependent Clp protease ATP-binding subunit ClpC K03696; Psort location: Cytoplasmic, score: 9.97. | 0.474 |
KWZ74743.1 | KWZ74742.1 | HMPREF3198_00380 | HMPREF3198_00379 | Hypothetical protein. | FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-17 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 10.00. | 0.596 |
KWZ74743.1 | KWZ74744.1 | HMPREF3198_00380 | HMPREF3198_00381 | Hypothetical protein. | Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5. | 0.686 |
KWZ74743.1 | KWZ74745.1 | HMPREF3198_00380 | HMPREF3198_00382 | Hypothetical protein. | Negative regulator of genetic competence ClpC/MecB; KEGG: mbb:BCG_3661c 0. clpC; putative ATP-dependent Clp protease ATP-binding subunit ClpC K03696; Psort location: Cytoplasmic, score: 9.97. | 0.457 |
KWZ74744.1 | KWZ74742.1 | HMPREF3198_00381 | HMPREF3198_00379 | Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5. | FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-17 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 10.00. | 0.533 |
KWZ74744.1 | KWZ74743.1 | HMPREF3198_00381 | HMPREF3198_00380 | Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5. | Hypothetical protein. | 0.686 |
KWZ74744.1 | KWZ74745.1 | HMPREF3198_00381 | HMPREF3198_00382 | Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5. | Negative regulator of genetic competence ClpC/MecB; KEGG: mbb:BCG_3661c 0. clpC; putative ATP-dependent Clp protease ATP-binding subunit ClpC K03696; Psort location: Cytoplasmic, score: 9.97. | 0.509 |
KWZ74745.1 | KWZ74742.1 | HMPREF3198_00382 | HMPREF3198_00379 | Negative regulator of genetic competence ClpC/MecB; KEGG: mbb:BCG_3661c 0. clpC; putative ATP-dependent Clp protease ATP-binding subunit ClpC K03696; Psort location: Cytoplasmic, score: 9.97. | FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-17 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 10.00. | 0.474 |
KWZ74745.1 | KWZ74743.1 | HMPREF3198_00382 | HMPREF3198_00380 | Negative regulator of genetic competence ClpC/MecB; KEGG: mbb:BCG_3661c 0. clpC; putative ATP-dependent Clp protease ATP-binding subunit ClpC K03696; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein. | 0.457 |
KWZ74745.1 | KWZ74744.1 | HMPREF3198_00382 | HMPREF3198_00381 | Negative regulator of genetic competence ClpC/MecB; KEGG: mbb:BCG_3661c 0. clpC; putative ATP-dependent Clp protease ATP-binding subunit ClpC K03696; Psort location: Cytoplasmic, score: 9.97. | Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5. | 0.509 |