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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74780.1Putative membrane protein; KEGG: sna:Snas_0956 1.7e-14 peptide methionine sulfoxide reductase; Psort location: CytoplasmicMembrane, score: 10.00. (301 aa)    
Predicted Functional Partners:
KWZ73581.1
ABC transporter, substrate-binding protein, QAT family; KEGG: cfu:CFU_3088 5.6e-64 proW; L-proline glycine betaine ABC transport system permease proW K02001; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
  0.569
KWZ74781.1
Putrescine-ornithine antiporter; KEGG: sgg:SGGBAA2069_c08160 1.4e-13 basic amino acid/polyamine antiporter K03294; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.503
pheT
phenylalanine--tRNA ligase, beta subunit; KEGG: mcu:HMPREF0573_10030 5.7e-245 pheT; phenylalanine--tRNA ligase K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.472
KWZ74782.1
Orn/Lys/Arg decarboxylase, major domain protein; KEGG: eic:NT01EI_3411 8.3e-260 ornithine decarboxylase K01581; Psort location: Cytoplasmic, score: 9.97.
  
    0.442
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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