STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWZ74790.1Putative Ktr system potassium uptake protein B; KEGG: bcv:Bcav_3269 3.4e-144 H(+)-transporting two-sector ATPase; Psort location: CytoplasmicMembrane, score: 10.00. (495 aa)    
Predicted Functional Partners:
KWZ74789.1
TrkA protein; KEGG: suq:HMPREF0772_12145 5.4e-27 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 7.50.
 
 0.989
KWZ72138.1
TrkA protein; KEGG: apb:SAR116_0219 9.3e-12 K+ transport systems, NAD-binding component K03499; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.819
KWZ72137.1
TrkA protein; KEGG: apb:SAR116_0219 3.1e-10 K+ transport systems, NAD-binding component K03499; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.806
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
     
 0.674
KWZ75159.1
NADH-ubiquinone/plastoquinone family protein; KEGG: bcv:Bcav_3818 1.1e-211 monovalent cation/H+ antiporter subunit A K05565; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.547
KWZ72111.1
Putative ribosomal RNA small subunit methyltransferase B; KEGG: jde:Jden_1312 2.1e-105 Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.540
KWZ74791.1
DNA binding domain, excisionase family.
       0.518
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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