STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74791.1DNA binding domain, excisionase family. (71 aa)    
Predicted Functional Partners:
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
  
  
  0.928
KWZ72894.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.600
KWZ74790.1
Putative Ktr system potassium uptake protein B; KEGG: bcv:Bcav_3269 3.4e-144 H(+)-transporting two-sector ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.517
KWZ72142.1
Hypothetical protein; KEGG: sbh:SBI_07124 0.0043 ribonuclease, Rne/Rng family; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 7.50.
  
     0.505
KWZ73044.1
Hypothetical protein.
  
     0.469
KWZ74789.1
TrkA protein; KEGG: suq:HMPREF0772_12145 5.4e-27 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 7.50.
       0.466
KWZ72515.1
DNA-binding helix-turn-helix protein; KEGG: mxa:MXAN_0261 6.6e-05 transcriptional regulator; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 7.50.
 
    0.460
KWZ73082.1
GtrA-like protein; KEGG: kcr:Kcr_0200 8.1e-05 glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.431
KWZ74208.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.411
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.408
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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