close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74793.1KEGG: mcu:HMPREF0573_10554 1.3e-55 gpmB; phosphoglycerate mutase; Psort location: Cytoplasmic, score: 7.50. (221 aa)    
Predicted Functional Partners:
KWZ72141.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.758
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.745
KWZ74486.1
Hypothetical protein; KEGG: gpo:GPOL_c22560 0.00095 priA; primosomal protein N' K04066; Psort location: Cytoplasmic, score: 7.50.
  
     0.743
KWZ74691.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.726
KWZ72548.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.721
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.712
KWZ72124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.709
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.705
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
  0.698
KWZ74792.1
HAD hydrolase, family IB; KEGG: crd:CRES_1952 2.3e-42 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 7.50.
    
  0.692
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.