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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74848.1KEGG: efu:HMPREF0351_12109 0.0011 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. (203 aa)    
Predicted Functional Partners:
KWZ74847.1
KEGG: pfe:PSF113_1990 2.0e-05 MarR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
     0.697
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
    
 0.538
KWZ74849.1
Nucleotidyl transferase; KEGG: ica:Intca_0922 2.2e-60 bifunctional glucosamine-1-phosphate acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase K04042; Psort location: Cytoplasmic, score: 9.97.
       0.466
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.442
KWZ72115.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.433
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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