STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74881.1Bacterial Transmembrane Pair family protein; Psort location: CytoplasmicMembrane, score: 9.55. (148 aa)    
Predicted Functional Partners:
KWZ74879.1
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 8.0e-49 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
       0.538
KWZ74880.1
KEGG: apb:SAR116_1198 1.3e-39 sugar ABC transporter permease K02025; Psort location: CytoplasmicMembrane, score: 10.00.
       0.538
KWZ74882.1
Intracellular protease, PfpI family; KEGG: car:cauri_0949 4.1e-68 intracellular protease; K05520 protease I; Psort location: Cytoplasmic, score: 7.50.
       0.536
KWZ74878.1
ABC transporter, solute-binding protein; KEGG: ebe:B21_03255 8.9e-34 ugpB; ugpB, subunit of glycerol-3-P ABC transporter K05813; Psort location: CytoplasmicMembrane, score: 9.68.
       0.521
KWZ74883.1
Amidohydrolase family protein; KEGG: sud:ST398NM01_2630 1.2e-63 5-carboxyvanillic acid decarboxylase; Psort location: Cytoplasmic, score: 7.50.
       0.442
KWZ74893.1
Serine transporter; KEGG: hiq:CGSHiGG_06840 0.00031 surE; stationary phase survival protein SurE K03835; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.412
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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