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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74908.1Hypothetical protein; KEGG: bbv:HMPREF9228_1219 7.7e-51 PHP domain-containing protein K07053; Psort location: Cytoplasmic, score: 7.50. (259 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
      0.898
KWZ74907.1
Aminopeptidase P domain protein; KEGG: ahe:Arch_1237 1.2e-171 peptidase M24; K01262 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.97; Belongs to the peptidase M24B family.
 
     0.719
KWZ72041.1
KEGG: ahe:Arch_0546 5.2e-77 inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase; Psort location: Cytoplasmic, score: 7.50.
 
      0.423
KWZ72082.1
Sua5/YciO/YrdC/YwlC family protein; KEGG: ova:OBV_22440 1.6e-14 coaE; dephospho-CoA kinase K07566; Psort location: Cytoplasmic, score: 7.50; Belongs to the SUA5 family.
 
    0.415
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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