STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74917.1Bacterial type II secretion system protein F domain protein; Psort location: CytoplasmicMembrane, score: 10.00. (282 aa)    
Predicted Functional Partners:
KWZ74920.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.977
KWZ74916.1
Type II/IV secretion system protein; KEGG: reh:H16_A0983 3.3e-59 cpaF3; flp pilus assembly ATPase CpaF K02283; Psort location: Cytoplasmic, score: 7.50.
  
 0.973
KWZ74918.1
Bacterial type II secretion system protein F domain protein; KEGG: rsa:RSal33209_1351 1.9e-15 tyrosine phenol-lyase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.957
KWZ74919.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.957
KWZ74921.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.952
KWZ73030.1
Hypothetical protein.
 
    0.802
KWZ73029.1
Hypothetical protein; KEGG: bln:Blon_2082 3.2e-05 lipopolysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.778
KWZ73031.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 7.50.
  
     0.772
KWZ74922.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.757
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.735
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.