STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74921.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (128 aa)    
Predicted Functional Partners:
KWZ74919.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.953
KWZ74917.1
Bacterial type II secretion system protein F domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.952
KWZ74920.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.948
KWZ74918.1
Bacterial type II secretion system protein F domain protein; KEGG: rsa:RSal33209_1351 1.9e-15 tyrosine phenol-lyase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.940
KWZ74916.1
Type II/IV secretion system protein; KEGG: reh:H16_A0983 3.3e-59 cpaF3; flp pilus assembly ATPase CpaF K02283; Psort location: Cytoplasmic, score: 7.50.
 
     0.814
KWZ74922.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.773
KWZ73029.1
Hypothetical protein; KEGG: bln:Blon_2082 3.2e-05 lipopolysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.756
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.728
KWZ72802.1
Hypothetical protein.
  
     0.708
KWZ74915.1
Phosphotransferase enzyme family protein; KEGG: scl:sce2725 2.1e-11 phosphotransferase; Psort location: Cytoplasmic, score: 7.50.
 
     0.705
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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