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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74946.1PDZ domain protein; KEGG: bbf:BBB_0450 5.6e-32 PDZ/DHR/GLGF domain containing protein K07177. (356 aa)    
Predicted Functional Partners:
KWZ74945.1
Putative hydrolase; Psort location: Cytoplasmic, score: 7.50.
 
     0.725
KWZ74943.1
Hypothetical protein.
       0.562
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.497
KWZ72124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.472
KWZ72888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.469
holA
KEGG: bcv:Bcav_1739 1.2e-75 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cellwall, score: 8.19.
 
     0.450
KWZ74486.1
Hypothetical protein; KEGG: gpo:GPOL_c22560 0.00095 priA; primosomal protein N' K04066; Psort location: Cytoplasmic, score: 7.50.
  
     0.442
KWZ72522.1
Methyltransferase small domain protein; KEGG: mph:MLP_11850 1.0e-39 putative methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.402
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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