STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74984.1FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 6.6e-14 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96. (929 aa)    
Predicted Functional Partners:
KWZ73155.1
WXG100 family type VII secretion target; Psort location: Extracellular, score: 9.72; Belongs to the WXG100 family.
 
 
 
 0.877
KWZ72171.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: ase:ACPL_8021 1.1e-27 Furin; Psort location: Extracellular, score: 9.73; Belongs to the peptidase S8 family.
  
 
 0.631
KWZ72172.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: ase:ACPL_8021 1.1e-38 Furin; Psort location: Extracellular, score: 9.73; Belongs to the peptidase S8 family.
  
 
 0.631
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
  
  
 0.600
KWZ74524.1
Stage 0 sporulation protein J family protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
  
     0.551
KWZ74765.1
FG-GAP repeat protein; KEGG: noc:Noc_1762 1.1e-24 Integrins alpha chain.
    
   0.548
KWZ74643.1
Hypothetical protein.
    
   0.548
KWZ74399.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bbp:BBPR_0025 8.7e-09 alpha-L-arabinofuranosidase; Psort location: Cellwall, score: 9.26.
    
   0.548
KWZ72028.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 1.2e-28 outer membrane adhesin-like protein; Psort location: CytoplasmicMembrane, score: 9.87.
    
   0.548
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.523
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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