STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74647.1Cytochrome C biogenesis protein transmembrane region; KEGG: rer:pREL1_0233 2.2e-44 putative disulfide bond formation protein; Psort location: CytoplasmicMembrane, score: 10.00. (274 aa)    
Predicted Functional Partners:
KWZ74646.1
DsbA-like protein; KEGG: rer:pREL1_0232 2.1e-25 putative disulfide bond formation protein; Psort location: Cellwall, score: 8.76.
 
   
 0.881
KWZ74855.1
Antioxidant, AhpC/TSA family; KEGG: bqy:MUS_2131 8.9e-18 resA; protein-disulfide reductase; Psort location: Cellwall, score: 8.75.
 
  
 0.778
KWZ74648.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KWZ74645.1
Hypothetical protein; KEGG: psa:PST_3725 6.1e-17 Mg2+ transport ATPase; K01531 Mg2+-importing ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.723
KWZ74644.1
KEGG: ske:Sked_37890 1.4e-163 tRNA adenylyltransferase; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 7.50; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.509
KWZ74183.1
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.466
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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