STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74660.1KEGG: pfr:PFREUD_02440 9.0e-128 caiC; crotonobetaine/carnitine-CoA ligase K02182; Psort location: Cytoplasmic, score: 9.97. (511 aa)    
Predicted Functional Partners:
KWZ74659.1
MaoC-like protein; KEGG: ahe:Arch_1360 3.6e-140 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; Psort location: Cytoplasmic, score: 7.50.
 
     0.890
KWZ74662.1
KEGG: pfr:PFREUD_02420 2.7e-174 caiA; crotonobetainyl-CoA dehydrogenase K08297; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.876
KWZ74663.1
Putative acetyl esterase; KEGG: ahe:Arch_1364 4.7e-67 alpha/beta hydrolase; K01066 esterase / lipase; Psort location: Cytoplasmic, score: 9.67.
 
 0.870
KWZ74664.1
Transporter, major facilitator family protein; KEGG: hiq:CGSHiGG_06730 7.3e-05 glpA; sn-glycerol-3-phosphate dehydrogenase subunit A K02445; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.865
KWZ74661.1
Putative crotonobetainyl-CoA:carnitine CoA-transferase; KEGG: ahe:Arch_1362 1.6e-160 L-carnitine dehydratase/bile acid-inducible protein F; K08298 crotonobetainyl-CoA:carnitine CoA-transferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the CoA-transferase III family.
 
   
 0.845
KWZ74800.1
O-succinylbenzoate-CoA ligase family protein; KEGG: cfi:Celf_0920 4.4e-64 AMP-dependent synthetase and ligase; K01911 O-succinylbenzoic acid--CoA ligase; Psort location: Cytoplasmic, score: 7.50.
  
     0.749
KWZ74658.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_1175530 3.9e-32 sugar transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.734
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.683
KWZ74657.1
Metallo-beta-lactamase domain protein; KEGG: eha:Ethha_0341 2.4e-31 Hydroxyacylglutathione hydrolase.
       0.659
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.658
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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