Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KWZ74665.1 | KWZ74666.1 | HMPREF3198_00658 | HMPREF3198_00659 | Hypothetical protein. | 3-dehydroquinate synthase; KEGG: pav:TIA2EST22_11490 1.9e-125 3-dehydroquinate synthase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)]; Psort location: Cytoplasmic, score: 7.50. | 0.513 |
KWZ74665.1 | KWZ74667.1 | HMPREF3198_00658 | HMPREF3198_00660 | Hypothetical protein. | Ribulokinase; KEGG: pax:TIA2EST36_11345 2.7e-167 ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribulokinase family. | 0.510 |
KWZ74666.1 | KWZ74665.1 | HMPREF3198_00659 | HMPREF3198_00658 | 3-dehydroquinate synthase; KEGG: pav:TIA2EST22_11490 1.9e-125 3-dehydroquinate synthase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)]; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.513 |
KWZ74666.1 | KWZ74667.1 | HMPREF3198_00659 | HMPREF3198_00660 | 3-dehydroquinate synthase; KEGG: pav:TIA2EST22_11490 1.9e-125 3-dehydroquinate synthase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)]; Psort location: Cytoplasmic, score: 7.50. | Ribulokinase; KEGG: pax:TIA2EST36_11345 2.7e-167 ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribulokinase family. | 0.948 |
KWZ74667.1 | KWZ74665.1 | HMPREF3198_00660 | HMPREF3198_00658 | Ribulokinase; KEGG: pax:TIA2EST36_11345 2.7e-167 ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribulokinase family. | Hypothetical protein. | 0.510 |
KWZ74667.1 | KWZ74666.1 | HMPREF3198_00660 | HMPREF3198_00659 | Ribulokinase; KEGG: pax:TIA2EST36_11345 2.7e-167 ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribulokinase family. | 3-dehydroquinate synthase; KEGG: pav:TIA2EST22_11490 1.9e-125 3-dehydroquinate synthase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)]; Psort location: Cytoplasmic, score: 7.50. | 0.948 |