Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74681.1Hypothetical protein; KEGG: bnm:BALAC2494_00539 3.3e-75 lysine--tRNA ligase; Psort location: CytoplasmicMembrane, score: 10.00. (815 aa)    
Predicted Functional Partners:
KWZ74680.1
Putative esterase; KEGG: ase:ACPL_3309 3.9e-15 Endo-1,4-beta-xylanase Z; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.974
KWZ74679.1
Transglycosylase; KEGG: ahe:Arch_1803 1.7e-146 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.510
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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