STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74534.1SNARE-like domain protein; Psort location: CytoplasmicMembrane, score: 10.00. (229 aa)    
Predicted Functional Partners:
KWZ74756.1
Efflux ABC transporter, permease protein; KEGG: ccm:Ccan_09570 2.1e-11 Macrolide export ATP-binding/permease macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.710
KWZ72170.1
HAD hydrolase, family IIB; KEGG: pfr:PFREUD_07400 7.5e-69 pmm; phosphomannomutase K07024; Psort location: Cytoplasmic, score: 7.50.
      0.586
truA
Putative tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
    0.532
nadK
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
  0.526
KWZ74531.1
Putative integral membrane protein MviN; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.523
KWZ74532.1
Hypothetical protein.
       0.449
KWZ74533.1
Hydrolase, NUDIX family; Psort location: Cytoplasmic, score: 7.50; Belongs to the Nudix hydrolase family.
       0.424
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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